Stem-loop cja-mir-1302

Accession

MI0032171

Description

Callithrix jacchus cja-mir-1302 precursor miRNA

Sequence

aaaaugcagaagcacagcuaaaauuugaguuucagauaaacaaauuuuucuuagaauaaguauaucuccaugcaacauUUGGGACAUACUUAUGCUAAAacauuauuuguguuucaucugaaauucaaauucaacuggauauccuguauuuu
(((((((((.....(((....((((((((((((((((..((((((.....((((.((((((((.((.(((.........))))).)))))))).))))......)))))).....))))))))))))))))...)))......)))))))))

Structure

         -aagca   cuaa                ---aa      -uuuuc    a        a  u   ugc 
aaaaugcag      cag    aauuugaguuucagau     acaaau      uuag auaaguau uc cca   a
|||||||||      |||    ||||||||||||||||     ||||||      |||| |||||||| || |||   a
uuuuauguc      guc    uuaaacuuaaagucua     uguuua      AAUC UAUUCAUA AG GGU   c
         cuauag   -aac                cuuug      uuacaA    G        C  -   Uua 

Annotation confidence Not enough data

Genome context

chr6: 123177966-123178117 [-]

Mature cja-miR-1302

• Accession: MIMAT0039634
• Description: Callithrix jacchus cja-miR-1302 mature miRNA
• Sequence: 79 - UUGGGACAUACUUAUGCUAAA - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857