Stem-loop cja-mir-1193

Accession

MI0032155

Description

Callithrix jacchus cja-mir-1193 precursor miRNA

Sequence

gcucuccaggguagcugaggggaugguagaccggugacgugcacuucauuuaugaugUAGGUCACCCGUUUGACUAUCcaccagugcccgguccagc
(((..((.(((((.(((.(.(((((((((((.((((((.((((..(((....))))))).)))))).)))).))))))).)))))))))))...)))

Structure

   -cu  a     g   a g       -    c      g    cu   u 
gcu   cc gggua cug g ggauggu agac ggugac ugca  uca u
|||   || ||||| ||| | ||||||| |||| |||||| ||||  |||  
cga   gg cccgu gac c cCUAUCA UUUG CCACUG AUgu  agu u
   ccu  -     -   - a       G    C      G    --   a 

Annotation confidence Not enough data

Genome context

chr10: 126946662-126946758 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from cja-mir-1193

Mature cja-miR-1193

• Accession: MIMAT0039620
• Description: Callithrix jacchus cja-miR-1193 mature miRNA
• Sequence: 58 - UAGGUCACCCGUUUGACUAUC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857