Stem-loop cja-mir-548j

Accession

MI0032138

Description

Callithrix jacchus cja-mir-548j precursor miRNA

Sequence

auuaguuauuagguuggugcaaaaguaauuguguguuugcaauuaguaauauuaauggCAAAAAUCUCAAUUACUUUUGCagcaaccuaauaacuagu
((((((((((((((((.((((((((((((((....(((((.((((((...)))))).))))).....)))))))))))))).))))))))))))))))

Structure

                g              -ugug     a      a 
auuaguuauuagguug ugcaaaaguaauug     uuugc auuagu  
|||||||||||||||| ||||||||||||||     ||||| |||||| a
ugaucaauaauccaac aCGUUUUCAUUAAC     AAACg uaauua  
                g              UCUAA     g      u 

Annotation confidence Not enough data

Genome context

chr9: 48418992-48419089 [+]

Mature cja-miR-548j

• Accession: MIMAT0039602
• Description: Callithrix jacchus cja-miR-548j mature miRNA
• Sequence: 59 - CAAAAAUCUCAAUUACUUUUGC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857