Stem-loop cja-mir-548h

Accession

MI0032136

Description

Callithrix jacchus cja-mir-548h precursor miRNA

Sequence

ugcacguccuuguauuagguugaugcaaaagcaagugaguuuuucgcaauuacacuucuaauugCAAAAACCACAAUUUCUUUUGCaccaaccuaauacuugauugca
((((.(((...(((((((((((.((((((((...(((.((((((.(((((((......)))))))))))))))).....)))))))).)))))))))))..)))))))

Structure

    c   cuu           a        --caa   a      c       ca 
ugca guc   guauuagguug ugcaaaag     gug guuuuu gcaauua  c
|||| |||   ||||||||||| ||||||||     ||| |||||| |||||||   
acgu uag   cauaauccaac aCGUUUUC     CAC CAAAAA Cguuaau  u
    -   -uu           c        UUUAA   -      -       cu 

Annotation confidence Not enough data

Genome context

chr20: 34004562-34004669 [+]

Mature cja-miR-548h

• Accession: MIMAT0039600
• Description: Callithrix jacchus cja-miR-548h mature miRNA
• Sequence: 65 - CAAAAACCACAAUUUCUUUUGC - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857