Stem-loop cja-mir-302d

Accession

MI0032123

Description

Callithrix jacchus cja-mir-302d precursor miRNA

Sequence

aggaacccccucuACUUUAACAUGGAGGCACUUGCugagacaugacaaaaaUAAGUGCUUCCAUGUUUGAGUGUggugguuccu
(((((((.((..(((((.((((((((((((((((.................)))))))))))))))).))))).)).)))))))

Structure

       c  uc     U                Cugagac 
aggaacc cc  uACUU AACAUGGAGGCACUUG       a
||||||| ||  ||||| ||||||||||||||||       u
uccuugg gg  GUGAG UUGUACCUUCGUGAAU       g
       u  -U     U                aaaaaca 

Annotation confidence Not enough data

Genome context

chr3: 80984903-80984986 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from cja-mir-302d

Mature cja-miR-302d-5p

• Accession: MIMAT0039589
• Description: Callithrix jacchus cja-miR-302d-5p mature miRNA
• Sequence: 14 - ACUUUAACAUGGAGGCACUUGC - 35
• Evidence: experimental ; Illumina [1]

Mature cja-miR-302d-3p

• Accession: MIMAT0039590
• Description: Callithrix jacchus cja-miR-302d-3p mature miRNA
• Sequence: 52 - UAAGUGCUUCCAUGUUUGAGUGU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857