Stem-loop cja-mir-561

Accession

MI0032115

Description

Callithrix jacchus cja-mir-561 precursor miRNA

Sequence

ucauccacgcuuccccaaggaacuucaagaauuauaaauuuugucuuuguagauccagcAAAGUUUAAGAUCCUUGAUGUUccuggaggacugguggauga
((((((((...((((((.(((((.(((((.(((.((((((((((...((......)))))))))))).))).))))).)))))))).)))...))))))))

Structure

        gcu   -   a     u     a   a          cuu  ua 
ucauccac   ucc cca ggaac ucaag auu uaaauuuugu   ug  g
||||||||   ||| ||| ||||| ||||| ||| ||||||||||   ||   
aguaggug   agg ggu ccUUG AGUUC UAG AUUUGAAAcg   ac  a
        guc   a   -     U     C   A          ---  cu 

Annotation confidence Not enough data

Genome context

chr6: 103464311-103464411 [-]

Mature cja-miR-561

• Accession: MIMAT0039580
• Description: Callithrix jacchus cja-miR-561 mature miRNA
• Sequence: 60 - AAAGUUUAAGAUCCUUGAUGUU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857