Stem-loop cja-mir-548o-1

Accession

MI0032111

Description

Callithrix jacchus cja-mir-548o-1 precursor miRNA

Sequence

aauauaaaagagaaaaauuauuagguuggugcAAAAGUAAUUGCGGUCUUUGcaacugaaaguaauggcaaaaaucacaauuaguuuuguaccaacuuaauauauguuuggauauauauu
((((((.....(((....((((((((((((((((((.((((((.(((.(((((..............))))).))).)))))).))))))))))))))))))....))).....))))))

Structure

      aaaga   aaau                  G      C   C     aacuga 
aauaua     gaa    uauuagguuggugcAAAA UAAUUG GGU UUUGc      a
||||||     |||    |||||||||||||||||| |||||| ||| |||||       
uuauau     uuu    auaauucaaccauguuuu auuaac cua aaacg      a
      auagg   guau                  g      a   a     guaaug 

Annotation confidence Not enough data

Genome context

chr5: 14433673-14433792 [+]

Mature cja-miR-548o

• Accession: MIMAT0039578
• Description: Callithrix jacchus cja-miR-548o mature miRNA
• Sequence: 33 - AAAAGUAAUUGCGGUCUUUG - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857