Stem-loop cja-mir-548n-2

Accession

MI0032082

Description

Callithrix jacchus cja-mir-548n-2 precursor miRNA

Sequence

ccuucgugauggcuuuaauaguauuagguugaugcaaaagcaauugcgguuucugcauugaaagugauggcAGAAACUGCAGUUACUUUUGCaccaacguaauauauguaagaacaaugcggccggg
((.(((((.((..((((...((((((.((((.((((((((.((((((((((((((((((......))).))))))))))))))).)))))))).)))).))))))...))))..)).)))))..)).

Structure

-  -u     a  gc    aua      g    a        c               -   ga 
 cc  ucgug ug  uuua   guauua guug ugcaaaag aauugcgguuucugc auu  a
 ||  ||||| ||  ||||   |||||| |||| |||||||| ||||||||||||||| |||   
 gg  ggcgu ac  gaau   uauaau caac aCGUUUUC UUGACGUCAAAGAcg uag  a
g  cc     a  aa    gua      g    c        A               g   ug 

Annotation confidence Not enough data

Genome context

chr17: 74097195-74097321 [+]

Mature cja-miR-548n

• Accession: MIMAT0039550
• Description: Callithrix jacchus cja-miR-548n mature miRNA
• Sequence: 72 - AGAAACUGCAGUUACUUUUGC - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857