Stem-loop cja-mir-548b

Accession

MI0032080

Description

Callithrix jacchus cja-mir-548b precursor miRNA

Sequence

ugcuauagcuguaaguauuagguugguACAAAAGUCACUGUGGAUUUUGUgacuacuuuuaauggcaaaaccccaaugacuuuuauaccaaccuauaauucuuucuuaggcuguggca
((((((((((..(((...((((((((((.((((((((.((.((.((((((.(.((....)).).)))))).)))).)))))))).)))))))))).....))).....))))))))))

Structure

          ---gu   --uau          C        C  U  A      g c  c 
ugcuauagcu     aag     uagguugguA AAAAGUCA UG GG UUUUGU a ua u
||||||||||     |||     |||||||||| |||||||| || || |||||| | ||  
acggugucgg     uuc     auccaaccau uuuucagu ac cc aaaacg u au u
          auucu   uuaau          a        a  -  c      g a  u 

Annotation confidence Not enough data

Genome context

chr8: 59675187-59675304 [-]

Mature cja-miR-548b

• Accession: MIMAT0039549
• Description: Callithrix jacchus cja-miR-548b mature miRNA
• Sequence: 28 - ACAAAAGUCACUGUGGAUUUUGU - 50
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857