Stem-loop cja-mir-510a

Accession

MI0032072

Description

Callithrix jacchus cja-mir-510a precursor miRNA

Sequence

ugcgugauugaauauuuaggcuguguucccacucucaggcaugcuauauguguguggugcucuacuccagagaguagcaaucauguauaauuaagggugAUUGAAACCUCUGAGAGUAGAguaacgcaagacacauacuacacaugcagugacauugcagguauuuaguugcaugca
(((((((((((((((((..((.((((...((((.....(((((...((((((((((..((((((((((((((.((..(((((((.(........).)))))))..))))))).)))))))))..)))...))))))).....))))))))))))).)))))))))))))..))))))

Structure

      --           ag  u    ucc    cucag     --cua       ---   gu         -     a  ag       g aua 
ugcgug  auugaauauuu  gc gugu   cacu     gcaug     uaugugu   gug  gcucuacuc cagag gu  caaucau u   a
||||||  |||||||||||  || ||||   ||||     |||||     |||||||   |||  ||||||||| ||||| ||  ||||||| |    
acguac  ugauuuaugga  cg uaca   guga     cguac     auacaca   cgc  ugAGAUGAG GUCUC CA  GUUAgug g   u
      gu           --  u    ---    -----     acauc       gaa   aa         A     -  AA       g aau 

Annotation confidence Not enough data

Genome context

chrX: 134465643-134465819 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cja-mir-510a

Mature cja-miR-510a

• Accession: MIMAT0039542
• Description: Callithrix jacchus cja-miR-510a mature miRNA
• Sequence: 100 - AUUGAAACCUCUGAGAGUAGA - 120
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857