Stem-loop cja-mir-518a

Accession

MI0032071

Description

Callithrix jacchus cja-mir-518a precursor miRNA

Sequence

ucaagcugugacaUUCCAGAGGGUUGCACUUUCUgcugucuaaaauaaaagaaagugcuucccuuuagaguguuacgguuuga
((((((((((((((((.((((((..(((((((((..(((.....)))..)))))))))..)))))).))))))))))))))))

Structure

                C      UU         gc   c 
ucaagcugugacaUUC AGAGGG  GCACUUUCU  ugu u
|||||||||||||||| ||||||  |||||||||  ||| a
aguuuggcauugugag uuuccc  cgugaaaga  aua a
                a      uu         aa   a 

Annotation confidence Not enough data

Genome context

chr22: 44895340-44895422 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from cja-mir-518a

Mature cja-miR-518a

• Accession: MIMAT0039541
• Description: Callithrix jacchus cja-miR-518a mature miRNA
• Sequence: 14 - UUCCAGAGGGUUGCACUUUCU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857