Stem-loop cja-mir-383b

Accession

MI0032070

Description

Callithrix jacchus cja-mir-383b precursor miRNA

Sequence

gcagcucaugcugggauccccaaaauagaggcacuauuccuuuugucuguacugggAAGUGCUUCGAUUUUGGGGAGCccugugugaguaggc
((.((((((((.(((.((((((((((.((((((((.((((.............)))))))))))).)))))))))).))).))))))))..))

Structure

  -a        u   a          a        a    uuuug 
gc  gcucaugc ggg uccccaaaau gaggcacu uucc     u
||  |||||||| ||| |||||||||| |||||||| ||||     c
cg  ugagugug ccC AGGGGUUUUA CUUCGUGA Aggg     u
  ga        u   G          G        -    ucaug 

Annotation confidence Not enough data

Genome context

chr22: 45044259-45044351 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from cja-mir-383b

Mature cja-miR-383b

• Accession: MIMAT0039540
• Description: Callithrix jacchus cja-miR-383b mature miRNA
• Sequence: 57 - AAGUGCUUCGAUUUUGGGGAGC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857