Stem-loop cja-mir-133a-1

Accession

MI0032058

Description

Callithrix jacchus cja-mir-133a-1 precursor miRNA

Sequence

caaugcuuugcuagagcugguaaaauggaaccaaaucgccucuucaauggauUUGGUCCCCUUCAACCAGCUGUagcuaugcauug
((((((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...))))))

Structure

      uuu    g       aa  u  a        gccuc 
caaugc   gcua agcuggu  aa gg accaaauc     u
||||||   |||| |||||||  || || ||||||||      
guuacg   cgaU UCGACCA  UU CC UGGUUuag     u
      uau    G       AC  C  C        guaac 

Annotation confidence Not enough data

Genome context

chr13: 59034539-59034624 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cja-mir-133a-1

Mature cja-miR-133a

• Accession: MIMAT0039529
• Description: Callithrix jacchus cja-miR-133a mature miRNA
• Sequence: 53 - UUGGUCCCCUUCAACCAGCUGU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857