Stem-loop cja-mir-9905

Accession

MI0032053

Description

Callithrix jacchus cja-mir-9905 precursor miRNA

Sequence

guaugacaguuuggcuccaggguuuuacagaaacugguuuuucaacuguugucacuagcagauaucaaaauaccaacucuaugcaguugagaguuuucaaUUGCACACAGUUGGUAUUUUUUgauauccgccagggacaacauugaaaaacugguuuuuaugaaauucuggagcuaaauuuuauau
((((((.((((((((((((((((((((.(((((((((((((((((.(((((((.((.((.((((((((((((((((((...((((((((((....))))))))))...)))))))))..))))))))).)).)).)))))))))))))))))))))))).))))))))))))))))))))))))))

Structure

      c                    c                 c       a  a  a         --         cua          a 
guauga aguuuggcuccaggguuuua agaaacugguuuuucaa uguuguc cu gc gauaucaaa  auaccaacu   ugcaguugag g
|||||| |||||||||||||||||||| ||||||||||||||||| ||||||| || || |||||||||  |||||||||   ||||||||||  
uauauu uuaaaucgaggucuuaaagu uuuuuggucaaaaaguu acaacag ga cg cuauagUUU  UAUGGUUGA   ACGUUaacuu u
      -                    a                 -       g  c  c         UU         CAC          u 

Annotation confidence Not enough data

Genome context

chr16: 75728901-75729086 [+]

Mature cja-miR-9905

• Accession: MIMAT0039525
• Description: Callithrix jacchus cja-miR-9905 mature miRNA
• Sequence: 101 - UUGCACACAGUUGGUAUUUUUU - 122
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857