Accession
MI0032047
Description
Callithrix jacchus
cja-mir-27b precursor miRNA
Sequence
ggaagaugcucaccggcccuuuauuuaugcccagcgaugaccucucugacaaggugcagagcuuagcugauuggugaacagugauugguuuccgcuuugUUCACAGUGGCUAAGUUCUGCaccugaagagaaggugagauggggacaguuaaguuggagccgcuggggcagaggcc
((....(((((..((((((((((.((.(.((((....(.((((((((....(((((((((((((((((.((((.(((((((....(((...)))..))))))))))))))))))))))))))))..)))).)))).)..)))).).)).))))..)).))))...)))))....))
((....(((((..((((((((((.((.(.((((....(.((((((((....(((((((((((((((((.((((.(((((((....(((...)))..))))))))))))))))))))))))))))..)))).)))).)..)))).).)).))))..)).))))...)))))....))
Structure
aaga -ac - -- u a g gcga g - gaca g g ugau u gg ugcuc cggc cc uuua uu u ccca u accu cucu aggugcagagcuuagcu auug ugaacag ugg || ||||| |||| || |||| || | |||| | |||| |||| ||||||||||||||||| |||| ||||||| ||| u cc acggg gccg gg gaau ga a gggu a ugga gaga uccaCGUCUUGAAUCGG UGAC ACUUguu gcc ggag guc a uu u c g --ag g a --ag - - --uc u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr1: 78275131-78275306 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from cja-mir-27b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cja-miR-27b
| Accession | MIMAT0039519 |
| Description | Callithrix jacchus cja-miR-27b mature miRNA |
| Sequence | 100 - UUCACAGUGGCUAAGUUCUGC - 120 |
| Evidence |
experimental
Illumina [1-2] |
References
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