Stem-loop cja-mir-934

Accession

MI0032033

Description

Callithrix jacchus cja-mir-934 precursor miRNA

Sequence

guaggguaucuugagacggucucuguaucuugagaaugaacuugagaaauaaggcuccUGUCUACUAUCAGAGACACUGAuaguguaaaacccagggucuccaguaauggacgggagccuuauuucugucacucaguguuuucacagauggaauuuguuucauuuuagccuc
..(((.((...((((((((..(((..(((((((((((((.....((((((((((((((((((((.(((..(((((.(((...((.....)).))).)))))..))).)))))))))))))))))))).....)))...)))))).)))))))..))))))))...)).))).

Structure

gu   g  ucu        uc   gu    -      ---   acuug                    C   CA     A   Aua  g 
  agg ua   ugagacgg  ucu  aucu ugagaa   uga     agaaauaaggcuccUGUCUA UAU  GAGAC CUG   gu u
  ||| ||   ||||||||  |||  |||| ||||||   |||     |||||||||||||||||||| |||  ||||| |||   || a
  ucc au   acuuuguu  agg  uaga acuuuu   acu     ucuuuauuccgagggcaggu aug  cucug gac   ca a
-c   g  uuu        ua   --    c      gug   cacug                    a   ac     g   --c  a 

Annotation confidence Not enough data

Genome context

chrX: 124293113-124293284 [+]

Mature cja-miR-934

• Accession: MIMAT0039507
• Description: Callithrix jacchus cja-miR-934 mature miRNA
• Sequence: 59 - UGUCUACUAUCAGAGACACUGA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857