Stem-loop cja-mir-7

Accession

MI0032013

Description

Callithrix jacchus cja-mir-7 precursor miRNA

Sequence

ggauauuggccuaguucugugUGGAAGACUAGUGAUUUUGUUGUUuuuagauaacuaaauugacaacaaaucacagucugccauauggcacaggccaugcc
((....((((((.((.((((((((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))))))).))))))))..))

Structure

  auau      a  u        A     A       U      --     a 
gg    uggccu gu cugugUGG AGACU GUGAUUU GUUGUU  uuuag u
||    |||||| || |||||||| ||||| ||||||| ||||||  |||||  
cc    accgga ca gguauacc ucuga cacuaaa caacag  aaauc a
  --gu      -  c        g     -       -      uu     a 

Annotation confidence Not enough data

Genome context

chr1: 84300233-84300333 [+]

Mature cja-miR-7

• Accession: MIMAT0039489
• Description: Callithrix jacchus cja-miR-7 mature miRNA
• Sequence: 22 - UGGAAGACUAGUGAUUUUGUUGUU - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857