Stem-loop cja-mir-339

Accession

MI0032007

Description

Callithrix jacchus cja-mir-339 precursor miRNA

Literature search

1 open access papers mention cja-mir-339
(1 sentences)

Sequence

ggggcggggcggaccgcucucccugucuuccaggagcucacgugugccugccugUGAGCGCCUCGACGACAGAGCCGgcgcccgcccc
((((((((((.(...(((((....(((.((.(((.(((((((.((....)).))))))).))).)).))))))))).)).))))))))

Structure

        -  g acc     cccu   u  c   a       u  g 
ggggcggg gc g   gcucu    guc uc agg gcucacg gu c
|||||||| || |   |||||    ||| || ||| ||||||| ||  
ccccgccc cg C   CGAGA    CAG AG UCC CGAGUgu cg c
        g  G ---     ----   C  C   G       c  u 

Annotation confidence Not enough data

Genome context

chr2: 56896307-56896394 [+]

Mature cja-miR-339

• Accession: MIMAT0039482
• Description: Callithrix jacchus cja-miR-339 mature miRNA
• Sequence: 55 - UGAGCGCCUCGACGACAGAGCCG - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857