Stem-loop cja-mir-494

Accession

MI0032001

Description

Callithrix jacchus cja-mir-494 precursor miRNA

Sequence

gauacucgaaggagagguuauccguguugucuucucuuuauuuaugaUGAAACAUACACGGGAAACCUCUuuuuuaguauc
((((((.((((((((((((.((((((((((.(((((.........)).)))))).))))))).))))))))))))))))))

Structure

      c            a       -   c   -  uuu 
gauacu gaaggagagguu uccgugu ugu uuc uc   a
|||||| |||||||||||| ||||||| ||| ||| ||   u
cuauga uuuuuUCUCCAA GGGCACA ACA AAG ag   u
      -            A       U   -   U  uau 

Annotation confidence Not enough data

Genome context

chr10: 126946254-126946334 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from cja-mir-494

Mature cja-miR-494

• Accession: MIMAT0039476
• Description: Callithrix jacchus cja-miR-494 mature miRNA
• Sequence: 48 - UGAAACAUACACGGGAAACCUCU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857