Stem-loop cja-mir-139

Accession

MI0031996

Description

Callithrix jacchus cja-mir-139 precursor miRNA

Sequence

cuggcucagguguauUCUACAGUGCACGUGUCUCCAGUguggcucggaggcuggagacgcggcccuguuggaguaacaacugaagccgg
(((((((((.((((((((((((.((.((((((((((((.(.......).)))))))))))))).))).)))))).))).))).))))))

Structure

      -   g   -      -   U  A            g gg 
cuggcu cag ugu auUCUA CAG GC CGUGUCUCCAGU u  c
|||||| ||| ||| |||||| ||| || |||||||||||| |  u
ggccga guc aca ugaggu guc cg gcgcagaggucg a  c
      a   a   a      u   c  -            g gg 

Annotation confidence Not enough data

Genome context

chr11: 66207547-66207635 [+]

Mature cja-miR-139

• Accession: MIMAT0039472
• Description: Callithrix jacchus cja-miR-139 mature miRNA
• Sequence: 16 - UCUACAGUGCACGUGUCUCCAGU - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857