Stem-loop cja-mir-335

Accession

MI0031980

Description

Callithrix jacchus cja-mir-335 precursor miRNA

Sequence

ugagcgggggUCAAGAGCAAUAACGAAAAAUGuuugucauaaaccgUUUUUCAUUAUUGCUCCUGACcuccucuca
((((.((((((((.(((((((((.((((((((.((......)).)))))))).))))))))).)))))))).))))

Structure

    c        A         C        u  gu 
ugag gggggUCA GAGCAAUAA GAAAAAUG uu  c
|||| |||||||| ||||||||| |||||||| ||   
acuc ccucCAGU CUCGUUAUU CUUUUUgc aa  a
    u        C         A        c  au 

Annotation confidence Not enough data

Genome context

chr8: 115758615-115758690 [-]

Mature cja-miR-335-5p

• Accession: MIMAT0039456
• Description: Callithrix jacchus cja-miR-335-5p mature miRNA
• Sequence: 11 - UCAAGAGCAAUAACGAAAAAUG - 32
• Evidence: experimental ; Illumina [1]

Mature cja-miR-335-3p

• Accession: MIMAT0039457
• Description: Callithrix jacchus cja-miR-335-3p mature miRNA
• Sequence: 47 - UUUUUCAUUAUUGCUCCUGAC - 67
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596