Stem-loop cja-mir-105

Accession

MI0031979

Description

Callithrix jacchus cja-mir-105 precursor miRNA

Sequence

gagugugcaucguggUCAAAUGCUCAGACUCCUGUGGuggcuguucaugcaccacggauguuugagcaugugcuacggugucuacuu
(((((.(((((((((.((.((((((((((..((((((((..........))))))))..)))))))))).))))))))))).)))))

Structure

     u         U  A          UC        gcug 
gagug gcaucgugg CA AUGCUCAGAC  CUGUGGug    u
||||| ||||||||| || ||||||||||  ||||||||     
uucau uguggcauc gu uacgaguuug  ggcaccac    u
     c         -  g          ua        guac 

Annotation confidence Not enough data

Genome context

chrX: 139305334-139305420 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-105

Mature cja-miR-105

• Accession: MIMAT0039455
• Description: Callithrix jacchus cja-miR-105 mature miRNA
• Sequence: 16 - UCAAAUGCUCAGACUCCUGUGG - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857