Stem-loop cja-mir-196b

Accession

MI0031967

Description

Callithrix jacchus cja-mir-196b precursor miRNA

Sequence

aacuggucggugauuUAGGUAGUUUCCUGUUGUUGGGauccaccuuucucucgacagcacgacacugccuucauuacuucaguu
((((((..((((((..(((((((.((.(((((((((((..........))))))))))).)).)))))))..))))))))))))

Structure

      uc      uU       U  C           ucca 
aacugg  ggugau  AGGUAGU UC UGUUGUUGGGa    c
||||||  ||||||  ||||||| || |||||||||||     
uugacu  ucauua  uccguca ag acgacagcucu    c
      --      cu       c  c           cuuu 

Annotation confidence Not enough data

Genome context

chr8: 28526347-28526430 [+]

Mature cja-miR-196b

• Accession: MIMAT0039444
• Description: Callithrix jacchus cja-miR-196b mature miRNA
• Sequence: 16 - UAGGUAGUUUCCUGUUGUUGGG - 37
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596