Stem-loop cja-mir-449c

Accession

MI0031965

Description

Callithrix jacchus cja-mir-449c precursor miRNA

Sequence

gugucaggUAGGCAGUGUAUUGCUAGCGGCUguuaauaauuuuaacaguugcugguugcacucccuucuguugc
((..((((.(((.((((((..(((((((((((((((.....))))))))))))))))))))).)))))))..))

Structure

  gu    U   C      UU               u 
gu  cagg AGG AGUGUA  GCUAGCGGCUguuaa a
||  |||| ||| ||||||  ||||||||||||||| a
cg  gucu ucc ucacgu  uggucguugacaauu u
  uu    -   c      --               u 

Annotation confidence Not enough data

Genome context

chr2: 152552514-152552587 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-449c

Mature cja-miR-449c

• Accession: MIMAT0039442
• Description: Callithrix jacchus cja-miR-449c mature miRNA
• Sequence: 9 - UAGGCAGUGUAUUGCUAGCGGCU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857