Stem-loop cja-mir-16-2

Accession

MI0031962

Description

Callithrix jacchus cja-mir-16-2 precursor miRNA

Sequence

auucuuguuccacucUAGCAGCACGUAAAUAUUGGCGuagugaaauauauauuaaacaccaauauuacugugcugcuuuagugugacagggau
(((((((((.((((..(((((((((..((((((((.((.................)).))))))))..)))))))))..)))).)))))))))

Structure

         c    cU         UA        C  agugaaa 
auucuuguu cacu  AGCAGCACG  AAUAUUGG Gu       u
||||||||| ||||  |||||||||  |||||||| ||       a
uagggacag guga  ucgucgugu  uuauaacc ca       u
         u    uu         ca        a  aauuaua 

Annotation confidence Not enough data

Genome context

chr17: 16921164-16921256 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-16-2

Mature cja-miR-16

• Accession: MIMAT0039440
• Description: Callithrix jacchus cja-miR-16 mature miRNA
• Sequence: 16 - UAGCAGCACGUAAAUAUUGGCG - 37
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596