Stem-loop cja-mir-10b

Accession

MI0031954

Description

Callithrix jacchus cja-mir-10b precursor miRNA

Sequence

gggacccagagguuguaacguugucuauauaUACCCUGUAGAACCGAAUUUGUgugguauccauauagucacagauucgauucuaggggaauauauggucgaugcaaaaacuucacguuuc
(((((...((((((....(((((.((((((((.((((.(((((.((((((((((.(.(((....))).))))))))))).))))))))).)))))))).)))))....))))))..)))))

Structure

     cca      guaa     u        A    G     C          u g   c 
gggac   gagguu    cguug cuauauaU CCCU UAGAA CGAAUUUGUg g uau c
|||||   ||||||    ||||| |||||||| |||| ||||| |||||||||| | |||  
cuuug   cuucaa    guagc gguauaua gggg aucuu gcuuagacac u aua a
     -ca      aaac     u        a    -     a          - g   u 

Annotation confidence Not enough data

Genome context

chr6: 42186363-42186483 [-]

Mature cja-miR-10b

• Accession: MIMAT0039433
• Description: Callithrix jacchus cja-miR-10b mature miRNA
• Sequence: 32 - UACCCUGUAGAACCGAAUUUGU - 53
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596