Stem-loop cja-mir-548l

Accession

MI0031939

Description

Callithrix jacchus cja-mir-548l precursor miRNA

Sequence

guauauuuagguuggcgcUAAAGUAAUUGUGGUUUUGGCcuuuauuuucaauggcaaaaaccucaauuacuuuugugccaaccuaaugcuuuac
((((...(((((((((((.((((((((((.((((((.(((............))).)))))).)))))))))).))))))))))))))).....

Structure

-----    auu           U          U      G   uuuau 
     guau   uagguuggcgc AAAGUAAUUG GGUUUU GCc     u
     ||||   ||||||||||| |||||||||| |||||| |||      
     cgua   auccaaccgug uuucauuaac ccaaaa cgg     u
cauuu    ---           u          u      a   uaacu 

Annotation confidence Not enough data

Genome context

chr4: 118979458-118979551 [-]

Mature cja-miR-548l

• Accession: MIMAT0039420
• Description: Callithrix jacchus cja-miR-548l mature miRNA
• Sequence: 19 - UAAAGUAAUUGUGGUUUUGGC - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857