Stem-loop cja-mir-376a-1

Accession

MI0031900

Description

Callithrix jacchus cja-mir-376a-1 precursor miRNA

Sequence

uggaagccuucuuugguauuuaaaagGUAGAUUCUCCUUCUAUGAGUacauuauuuaugauuaAUCAUAGAGGAAAAUCCACGUuuucaguaucaaaugcugcuuuga
..(((((....(((((((((.((((.((.((((.((((.((((((...(((.....))).....)))))))))).)))).)).)))).)))))))))....)))))..

Structure

ug     cuuc         u    g  A    C    U      --GUa   u 
  gaagc    uuugguauu aaaa GU GAUU UCCU CUAUGA     cau a
  |||||    ||||||||| |||| || |||| |||| ||||||     ||| u
  uuucg    aaacuauga uuuU CA CUAA AGGA GAUACU     gua u
ag     ucgu         c    G  C    A    -      Aauua   u 

Annotation confidence Not enough data

Genome context

chr10: 126958022-126958129 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from cja-mir-376a-1

Mature cja-miR-376a-5p

• Accession: MIMAT0039382
• Description: Callithrix jacchus cja-miR-376a-5p mature miRNA
• Sequence: 27 - GUAGAUUCUCCUUCUAUGAGU - 47
• Evidence: experimental ; Illumina [1]

Mature cja-miR-376a-3p

• Accession: MIMAT0039383
• Description: Callithrix jacchus cja-miR-376a-3p mature miRNA
• Sequence: 64 - AUCAUAGAGGAAAAUCCACGU - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857