Stem-loop cja-mir-421

Accession

MI0031896

Description

Callithrix jacchus cja-mir-421 precursor miRNA

Sequence

gugccuaauccggugcacauuguaggccucauuaaauguuuguugaaugaaaaaaugaaucAUCAACAGACAUUAAUUGGGCGCcugcucugugaucuccaugggcuc
..(((((....((..((((..((((((((((...((((((((((((.(((.........)))))))))))))))...)))).))))))..))))..))...)))))..

Structure

gu     aucc  ug    uu      -    uua            a   aaa 
  gccua    gg  caca  guaggc cuca   aauguuuguuga uga   a
  |||||    ||  ||||  |||||| ||||   |||||||||||| |||   a
  cgggu    uc  gugu  cgucCG GGGU   UUACAGACAACU Acu   u
cu     -acc  ua    cu      C    UAA            -   aag 

Annotation confidence Not enough data

Genome context

chrX: 65949343-65949450 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-421

Mature cja-miR-421

• Accession: MIMAT0039378
• Description: Callithrix jacchus cja-miR-421 mature miRNA
• Sequence: 62 - AUCAACAGACAUUAAUUGGGCGC - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857