Stem-loop cja-mir-487a

Accession

MI0031870

Description

Callithrix jacchus cja-mir-487a precursor miRNA

Sequence

gugggccgucagcaucgggcuucgguacuugaagagugguuaucccugcuguguucgcuuuauuuaugacgAAUCAUACAGGGACAUCCAGUUuuucaguaucaaauacugcuuuggagggccucc
..(((((.((.....(((..((.((((((.(((((.(((...((((((.(((((((((.........).)))).))))))))))...))).))))).)))))).))..))).....)).)))))..

Structure

gu     g  agcau   gc  c      u     g   uua      c    -    - uuu 
  gggcc uc     cgg  uu gguacu gaaga ugg   ucccug ugug uucg c   a
  ||||| ||     |||  || |||||| ||||| |||   |||||| |||| |||| |   u
  uccgg ag     guc  aa cuauga uuuUU ACC   AGGGAC AUAC AAgc g   u
cc     g  guuuc   au  a      c     G   UAC      -    U    a uau 

Annotation confidence Not enough data

Genome context

chr10: 126969792-126969917 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from cja-mir-487a

Mature cja-miR-487a

• Accession: MIMAT0039356
• Description: Callithrix jacchus cja-miR-487a mature miRNA
• Sequence: 72 - AAUCAUACAGGGACAUCCAGUU - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857