Stem-loop cja-mir-181a-2

Accession

MI0031859

Description

Callithrix jacchus cja-mir-181a-2 precursor miRNA

Sequence

gaggacuccaaggAACAUUCAACGCUGUCGGUGAGUuugggauuugaaaaaaaaccacugaccguugacuguaccuugggguccuu
(((((((((((((.(((.((((((..(((((((.((((.............))))))))))))))))).))).)))))))))))))

Structure

             A   U      CU       A    gggau 
gaggacuccaagg ACA UCAACG  GUCGGUG GUuu     u
||||||||||||| ||| ||||||  ||||||| ||||     u
uuccugggguucc ugu aguugc  cagucac caaa     g
             a   c      --       -    aaaaa 

Annotation confidence Not enough data

Genome context

chr1: 168507679-168507764 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-181a-2

Mature cja-miR-181a

• Accession: MIMAT0039345
• Description: Callithrix jacchus cja-miR-181a mature miRNA
• Sequence: 14 - AACAUUCAACGCUGUCGGUGAGU - 36
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596