Stem-loop cja-mir-216b

Accession

MI0031855

Description

Callithrix jacchus cja-mir-216b precursor miRNA

Sequence

cuucaaaguggcagacuggaAAAUCUCUGCAGGCAAAUGUGAugucacugaagaaaucacacaguuacccgcagagauucuacagucugacaccuucaag
.......(((.(((((((...(((((((((.((.((.((((((.((......)).))))))...)).)).)))))))))...))))))).))).......

Structure

cuucaaa   g       gaA         A  C  --A      g  ac 
       gug cagacug   AAUCUCUGC GG AA   UGUGAu uc  u
       ||| |||||||   ||||||||| || ||   |||||| ||   
       cac gucugac   uuagagacg cc uu   acacua ag  g
gaacuuc   a       auc         c  a  gac      a  aa 

Annotation confidence Not enough data

Genome context

chr14: 51373248-51373347 [+]

Mature cja-miR-216b

• Accession: MIMAT0039342
• Description: Callithrix jacchus cja-miR-216b mature miRNA
• Sequence: 21 - AAAUCUCUGCAGGCAAAUGUGA - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857