Stem-loop ssc-mir-9847-1

Accession

MI0031622

Description

Sus scrofa ssc-mir-9847-1 precursor miRNA

Sequence

ugcagaagaugcccauaccgagcccugguggaggcagccggucuUGCUCAGGGGGUCAGUGGGGCuuagaaacag
..........((((.(((.((.((((((..(((((.....)))))..))))))..)).)))))))..........

Structure

ugcagaagau    a   c  -g      ug     a 
          gccc uac ga  cccugg  gaggc g
          |||| ||| ||  ||||||  ||||| c
          CGGG GUG CU  GGGACU  Uucug c
gacaaagauu    -   A  GG      CG     g 

Annotation confidence Not enough data

Genome context

chr15: 155366681-155366755 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ssc-mir-9847-1

Mature ssc-miR-9847-3p

• Accession: MIMAT0037066
• Description: Sus scrofa ssc-miR-9847-3p mature miRNA
• Sequence: 45 - UGCUCAGGGGGUCAGUGGGGC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100