Stem-loop ssc-mir-9827

Accession

MI0031594

Description

Sus scrofa ssc-mir-9827 precursor miRNA

Sequence

ucaaaguccuGGUGAGAACUCAGAUUGUUGGCuuuauaagcgcaguaguccuuccacuaucugaauauguuuucauuuaauuggauguagc
.....((((.(((((((((((((((.((.((......(((.((....)).))))))).))))))....))))))))).....)))).....

Structure

ucaaa    ----u         ----      U  U  Cuuuau   c  a 
     gucc     GGUGAGAAC    UCAGAU GU GG      aag gc g
     ||||     |||||||||    |||||| || ||      ||| ||  
     uagg     uuacuuuug    agucua ca cc      uuc ug u
cgaug    uuaau         uaua      u  -  ------   c  a 

Annotation confidence Not enough data

Genome context

chr5: 53609775-53609865 [+]

Mature ssc-miR-9827-5p

• Accession: MIMAT0037045
• Description: Sus scrofa ssc-miR-9827-5p mature miRNA
• Sequence: 11 - GGUGAGAACUCAGAUUGUUGGC - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100