miRBase entry: ssc-mir-9820

Stem-loop ssc-mir-9820


Accession
MI0031587
Description
Sus scrofa ssc-mir-9820 precursor miRNA


Sequence

acccugcaguGAGGAGGAGGGAAGAAAGGCUgcugcuguucuucucgcagucuuccagcccucccccugcagcag
...((((((...((.((((((..(.((((((((.............)))))))).)..))))))))))))))...

Structure
acc      uGA  A      AA A        ugcug 
   cugcag   GG GGAGGG  G AAGGCUgc     u
   ||||||   || ||||||  | ||||||||     u
   gacguc   cc ccuccc  c uucugacg     c
gac      ---  -      ga c        cucuu 


Annotation confidence Not enough data
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Genome context
chr2: 146762443-146762517 [-]

Database links

Mature ssc-miR-9820-5p

Accession MIMAT0037038
Description Sus scrofa ssc-miR-9820-5p mature miRNA
Sequence 11 - GAGGAGGAGGGAAGAAAGGCU - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100