Stem-loop ssc-mir-9816

Accession

MI0031583

Description

Sus scrofa ssc-mir-9816 precursor miRNA

Sequence

uggaaaaacuucaggauccaguccaguuuuccagccacugaguuucugacuuCUGGAAGGAUUUGGGUAGGGAggaaaagguc
........((((...(((((((((....((((((.....(((((...)))))))))))))).))))))...))))........

Structure

uggaaaaa    agg      -   aguu      ccacu     u 
        cuuc   auccag ucc    uuccag     gaguu  
        ||||   |||||| |||    ||||||     ||||| c
        ggAG   UGGGUU AGG    AAGGUC     uucag  
cuggaaaa    GGA      U   ----      -----     u 

Annotation confidence Not enough data

Genome context

chr6: 860751-860833 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ssc-mir-9816

Mature ssc-miR-9816-3p

• Accession: MIMAT0037034
• Description: Sus scrofa ssc-miR-9816-3p mature miRNA
• Sequence: 53 - CUGGAAGGAUUUGGGUAGGGA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100