miRBase entry: ssc-mir-9810

Stem-loop ssc-mir-9810


Accession
MI0031577
Description
Sus scrofa ssc-mir-9810 precursor miRNA


Sequence

gaggagggcgagaggcguugaggcaggggagagugacgaggugcccuucauugucagccagggaCGAGCACGCGGCCACUCUCCCcucacuccga
....((.((.....)).))(((..(((((((((((.((..((((......(((((.......))))))))).))..)))))))))))..)))...

Structure
gaggagggcgagaggcguu   gc           -a  ag    ccuuca     ag 
                   gag  aggggagagug  cg  gugc      uuguc  c
                   |||  |||||||||||  ||  ||||      |||||  c
                   cuc  ucCCCUCUCAC  GC  CACG      AGCag  a
----------------agc   ac           CG  -G    ------     gg 


Annotation confidence Not enough data
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Genome context
chr4: 90746011-90746105 [+]

Database links

Mature ssc-miR-9810-3p

Accession MIMAT0037028
Description Sus scrofa ssc-miR-9810-3p mature miRNA
Sequence 65 - CGAGCACGCGGCCACUCUCCC - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100