Stem-loop ssc-mir-9809

Accession

MI0031576

Description

Sus scrofa ssc-mir-9809 precursor miRNA

Sequence

ugccauagcacuuuaagcaguugcggaaauugucagacgucugcuucaacaugagguauuauuCGACUUUUCAGGAUUGUUGUuguuaguagc
.((..(((((.....(((((((..(((((..(((.((....(((((((...)))))))....))))))))))..)))))))..)))))...))

Structure

u  -ca     cuuua       gc     uu   a  cguc       a 
 gc   uagca     agcaguu  ggaaa  guc ga    ugcuuca  
 ||   |||||     |||||||  |||||  ||| ||    ||||||| c
 cg   auugu     UUGUUAG  CUUUU  CAG Cu    auggagu  
-  aug     ---UG       GA     --   -  uauu       a 

Annotation confidence Not enough data

Genome context

chrX: 129677236-129677328 [+]

Mature ssc-miR-9809-3p

• Accession: MIMAT0037027
• Description: Sus scrofa ssc-miR-9809-3p mature miRNA
• Sequence: 64 - CGACUUUUCAGGAUUGUUGU - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100