Stem-loop ssc-mir-9790

Accession

MI0031553

Description

Sus scrofa ssc-mir-9790 precursor miRNA

Sequence

uggcuucucuggauaguucucacucucacgccccugacuacugcuucuaaaauccaaaguggaCAAAGAAUGAGGUCGGACACUgcacagaccu
.((....((((..(((((((.((.((((..(...((.(((((...............))))).))..)..)))))).))).))))..)))))).

Structure

u  cuuc    ga    -   c  u    cg ccc  a     gcuucu 
 gg    ucug  uagu ucu ac cuca  c   ug cuacu      a
 ||    ||||  |||| ||| || ||||  |   || |||||      a
 cc    agac  gUCA AGG UG GAGU  G   AC gguga      a
u  ----    ac    C   C  -    AA -AA  a     aaccua 

Annotation confidence Not enough data

Genome context

chr5: 11886968-11887061 [+]

Mature ssc-miR-9790-3p

• Accession: MIMAT0037008
• Description: Sus scrofa ssc-miR-9790-3p mature miRNA
• Sequence: 64 - CAAAGAAUGAGGUCGGACACU - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100