miRBase entry: ssc-mir-9790

Stem-loop ssc-mir-9790


Accession
MI0031553
Description
Sus scrofa ssc-mir-9790 precursor miRNA


Sequence

uggcuucucuggauaguucucacucucacgccccugacuacugcuucuaaaauccaaaguggaCAAAGAAUGAGGUCGGACACUgcacagaccu
.((....((((..(((((((.((.((((..(...((.(((((...............))))).))..)..)))))).))).))))..)))))).

Structure
u  cuuc    ga    -   c  u    cg ccc  a     gcuucu 
 gg    ucug  uagu ucu ac cuca  c   ug cuacu      a
 ||    ||||  |||| ||| || ||||  |   || |||||      a
 cc    agac  gUCA AGG UG GAGU  G   AC gguga      a
u  ----    ac    C   C  -    AA -AA  a     aaccua 


Annotation confidence Not enough data
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Genome context
chr5: 11886968-11887061 [+]

Database links

Mature ssc-miR-9790-3p

Accession MIMAT0037008
Description Sus scrofa ssc-miR-9790-3p mature miRNA
Sequence 64 - CAAAGAAUGAGGUCGGACACU - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100