Stem-loop ssc-mir-9787

Accession

MI0031548

Description

Sus scrofa ssc-mir-9787 precursor miRNA

Sequence

aaauuucagcguuaucauuacgguuuuguugucuucaucacuauuaagguuagaaaacuucAGAGAAAGAGAUCGUUGGGUgcuggaaaug
...((((((((...(((..((((((((.((.(((......(((.......)))........))).)).))))))))))).))))))))...

Structure

aaa        uua   uu        g  g   --ucauca   uu 
   uuucagcg   uca  acgguuuu uu ucu        cua  a
   ||||||||   |||  |||||||| || |||        |||  a
   aaggucgU   GGU  UGCUAGAG AA AGA        gau  g
gua        --G   --        A  G   cuucaaaa   ug 

Annotation confidence Not enough data

Genome context

chr1: 12884779-12884869 [-]

Mature ssc-miR-9787-3p

• Accession: MIMAT0037004
• Description: Sus scrofa ssc-miR-9787-3p mature miRNA
• Sequence: 62 - AGAGAAAGAGAUCGUUGGGU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100