miRBase entry: ssc-mir-9786-1

Stem-loop ssc-mir-9786-1


Accession
MI0031546
Description
Sus scrofa ssc-mir-9786-1 precursor miRNA


Sequence

cgcgcaucuagggcacccuaagaguuuaggauguagacaggcagggauaggaaguguaAGAAUUCUAGGUCGGAGGGUcaucaugagc
.((.(.....).))(((((..((.((((((((....(((...............)))....))))))))))..)))))..........

Structure
cgcgcaucuagggc     aa  g        guag   ggcagg 
              acccu  ga uuuaggau    aca      g
              |||||  || ||||||||    |||      a
              UGGGA  CU GGAUCUUA    ugu      u
----cgaguacuac     GG  -        AGAa   gaagga 


Annotation confidence Not enough data
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Genome context
chrX: 38596106-38596193 [+]

Database links

Mature ssc-miR-9786-3p

Accession MIMAT0037003
Description Sus scrofa ssc-miR-9786-3p mature miRNA
Sequence 59 - AGAAUUCUAGGUCGGAGGGU - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100