Stem-loop oha-mir-449c

Accession

MI0031471

Description

Ophiophagus hannah oha-mir-449c precursor miRNA

Sequence

gugggaugguuUGGCAGUGUACCUCUUAGUUAGCUguuguacauauuccaGCAACUAAGUACACUUCCAUAuuauugcacaau
(((.((((((.(((.(((((((...((((((.((((............))))))))))))))))).))).)))))).)))...

Structure

---   g      u   C       CUC      A    uugua 
   gug gauggu UGG AGUGUAC   UUAGUU GCUg     c
   ||| |||||| ||| |||||||   |||||| ||||      
   cac uuauuA ACC UCACAUG   AAUCAA CGac     a
uaa   g      U   U       ---      -    cuuau 

Annotation confidence Not enough data

Genome context

AZIM01000175.1: 574995-575077 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-449c

Mature oha-miR-449c-5p

• Accession: MIMAT0036927
• Description: Ophiophagus hannah oha-miR-449c-5p mature miRNA
• Sequence: 12 - UGGCAGUGUACCUCUUAGUUAGCU - 35
• Evidence: not_experimental

Mature oha-miR-449c-3p

• Accession: MIMAT0036928
• Description: Ophiophagus hannah oha-miR-449c-3p mature miRNA
• Sequence: 51 - GCAACUAAGUACACUUCCAUA - 71
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656