Stem-loop oha-mir-449a

Accession

MI0031470

Description

Ophiophagus hannah oha-mir-449a precursor miRNA

Sequence

uguguguguaguggaaUGGCAGUGUACUGUUAGCUGGAuggauauccagauggcACCAGCUGACAUUCAGCUGCCAgccuacggcacauauuuugg
.((((((((.((((..(((((((....((((((((((.((.............))))))))))))....)))))))..)))).)))))))).....

Structure

----u        a    aa       GUAC          A  gauau 
     gugugugu gugg  UGGCAGU    UGUUAGCUGG ug     c
     |||||||| ||||  |||||||    |||||||||| ||     c
     uauacacg cauc  ACCGUCG    ACAGUCGACC Ac     a
gguuu        g    cg       ACUU          -  gguag 

Annotation confidence Not enough data

Genome context

AZIM01000175.1: 575592-575687 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-449a

Mature oha-miR-449a-5p

• Accession: MIMAT0036925
• Description: Ophiophagus hannah oha-miR-449a-5p mature miRNA
• Sequence: 17 - UGGCAGUGUACUGUUAGCUGGA - 38
• Evidence: not_experimental

Mature oha-miR-449a-3p

• Accession: MIMAT0036926
• Description: Ophiophagus hannah oha-miR-449a-3p mature miRNA
• Sequence: 55 - ACCAGCUGACAUUCAGCUGCCA - 76
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656