Stem-loop oha-mir-429

Accession

MI0031469

Description

Ophiophagus hannah oha-mir-429 precursor miRNA

Sequence

cugcuugccggccgaucgcuGUCUUACCAGACAAAUUUAGAucuuaaucuaucgcugucUAAUACUGUCUGGUAAUGCCGUCgauuugc
..........((.((((((.((.((((((((((...((((((..............))))))...)))))))))).)).).))))).))

Structure

cugcuugccg  c     - u  C          AAU      cuuaau 
          gc gaucg c GU UUACCAGACA   UUAGAu      c
          || ||||| | || ||||||||||   ||||||       
          cg uuagC G CG AAUGGUCUGU   AAUcug      u
----------  u     U C  U          CAU      ucgcua 

Annotation confidence Low

Genome context

AZIM01000256.1: 137861-137949 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-429

Mature oha-miR-429-5p

• Accession: MIMAT0036923
• Description: Ophiophagus hannah oha-miR-429-5p mature miRNA
• Sequence: 21 - GUCUUACCAGACAAAUUUAGA - 41
• Evidence: not_experimental

Mature oha-miR-429-3p

• Accession: MIMAT0036924
• Description: Ophiophagus hannah oha-miR-429-3p mature miRNA
• Sequence: 60 - UAAUACUGUCUGGUAAUGCCGUC - 82
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656