Stem-loop oha-mir-27a

Accession

MI0031437

Description

Ophiophagus hannah oha-mir-27a precursor miRNA

Sequence

gggcAGGGCUUAGCUCACUUGUGAACagcguuugauucagccaugUUCACAGUGGCUAAGUUCCGCCucuu
((((.(((((((((.((((.(((((((..(((......)))..)))))))))))))))))))).))))...

Structure

---    A         U    U       gc   ug 
   gggc GGGCUUAGC CACU GUGAACa  guu  a
   |||| ||||||||| |||| |||||||  |||   
   uCCG CUUGAAUCG GUGA CACUUgu  cga  u
uuc    C         -    -       ac   cu 

Annotation confidence Not enough data

Genome context

AZIM01000021.1: 587262-587332 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from oha-mir-27a

Mature oha-miR-27a-5p

• Accession: MIMAT0036865
• Description: Ophiophagus hannah oha-miR-27a-5p mature miRNA
• Sequence: 5 - AGGGCUUAGCUCACUUGUGAAC - 26
• Evidence: not_experimental

Mature oha-miR-27a-3p

• Accession: MIMAT0036866
• Description: Ophiophagus hannah oha-miR-27a-3p mature miRNA
• Sequence: 46 - UUCACAGUGGCUAAGUUCCGCC - 67
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656