Stem-loop oha-mir-221

Accession

MI0031426

Description

Ophiophagus hannah oha-mir-221 precursor miRNA

Sequence

gaugauccagcuuuugggccuucACCUGGCAUACAAUGUAGAAUACUGUguuuguuaagcaacAGCUACAUUGUCUGCUGGGUUUCaggcugucuggaaguaca
.....(((((......(((((..((((((((.(((((((((....((((((((...)))).))))))))))))).))))))))...)))))..)))))......

Structure

-gauga     cuuuug     -uc        U         AAUA    -    g 
      uccag      ggccu   ACCUGGCA ACAAUGUAG    CUGU guuu  
      |||||      |||||   |||||||| |||||||||    |||| |||| u
      agguc      ucgga   UGGGUCGU UGUUACAUC    GAca cgaa  
acauga     ----ug     CUU        C         ----    a    u 

Annotation confidence Not enough data

Genome context

AZIM01002126.1: 54879-54982 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-221

Mature oha-miR-221-5p

• Accession: MIMAT0036846
• Description: Ophiophagus hannah oha-miR-221-5p mature miRNA
• Sequence: 24 - ACCUGGCAUACAAUGUAGAAUACUGU - 49
• Evidence: not_experimental

Mature oha-miR-221-3p

• Accession: MIMAT0036847
• Description: Ophiophagus hannah oha-miR-221-3p mature miRNA
• Sequence: 64 - AGCUACAUUGUCUGCUGGGUUUC - 86
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656