Stem-loop oha-mir-19b

Accession

MI0031396

Description

Ophiophagus hannah oha-mir-19b precursor miRNA

Sequence

uaaacacuguucucugguuAGUUUUGCAGGUUUGCAUCCAGCuguaugauacucugcUGUGCAAAUCCAUGCAAAACUGAcuguggcagugaaaag
....(((((((...((((((((((((((((((((((..((((.............)))))))))).)).)))))))))))))).))))))).....

Structure

-uaaa       cuc              -  -      UC    uguau 
     cacuguu   ugguuAGUUUUGCA GG UUUGCA  CAGC     g
     |||||||   |||||||||||||| || ||||||  ||||     a
     gugacgg   gucAGUCAAAACGU CC AAACGU  GUcg     u
gaaaa       --u              A  U      --    ucuca 

Annotation confidence Not enough data

Genome context

AZIM01002132.1: 157823-157918 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from oha-mir-19b

Mature oha-miR-19b-5p

• Accession: MIMAT0036797
• Description: Ophiophagus hannah oha-miR-19b-5p mature miRNA
• Sequence: 20 - AGUUUUGCAGGUUUGCAUCCAGC - 42
• Evidence: not_experimental

Mature oha-miR-19b-3p

• Accession: MIMAT0036798
• Description: Ophiophagus hannah oha-miR-19b-3p mature miRNA
• Sequence: 58 - UGUGCAAAUCCAUGCAAAACUGA - 80
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656