Stem-loop oha-mir-199c

Accession

MI0031394

Description

Ophiophagus hannah oha-mir-199c precursor miRNA

Sequence

ucaaccugcuccgucgcCCCAGUGUUCAGACUACCUGUUCaggacaaugcuguugUACAGUAGUCUGCACAUUGGUUagacugggcaagggaaugca
....(((((((.(((...(((((((.((((((((.(((....((((....))))..))))))))))).)))))))...))).)))).))).......

Structure

---ucaa   -    c   gcC       U        C   UCag    a 
       ccu gcuc guc   CCAGUGU CAGACUAC UGU    gaca u
       ||| |||| |||   ||||||| |||||||| |||    ||||  
       gga cggg cag   GGUUACA GUCUGAUG ACA    uugu g
acguaag   a    u   aUU       C        -   --Ug    c 

Annotation confidence Not enough data

Genome context

AZIM01005115.1: 134705-134801 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-199c

Mature oha-miR-199c-5p

• Accession: MIMAT0036793
• Description: Ophiophagus hannah oha-miR-199c-5p mature miRNA
• Sequence: 18 - CCCAGUGUUCAGACUACCUGUUC - 40
• Evidence: not_experimental

Mature oha-miR-199c-3p

• Accession: MIMAT0036794
• Description: Ophiophagus hannah oha-miR-199c-3p mature miRNA
• Sequence: 56 - UACAGUAGUCUGCACAUUGGUU - 77
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656