Stem-loop oha-mir-18b

Accession

MI0031382

Description

Ophiophagus hannah oha-mir-18b precursor miRNA

Sequence

uuccuugugcUAAGGUGCAUCUAGUGCAGUUAGuggacuaacuuacaaucuACUGCCCUGAGUGCUCCUUCUGgcacacg
.....((((((((((.((((.(((.(((((...((..........))....))))).))).)))).)))..)))))))..

Structure

uuccu       --   U    C   U     -UAG  gacu 
     ugugcUA  AGG GCAU UAG GCAGU    ug    a
     |||||||  ||| |||| ||| |||||    ||     
     acacgGU  UCC CGUG GUC CGUCA    ac    a
---gc       CU   U    A   C     ucua  auuc 

Annotation confidence Not enough data

Genome context

AZIM01002644.1: 177020-177099 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from oha-mir-18b

Mature oha-miR-18b-5p

• Accession: MIMAT0036770
• Description: Ophiophagus hannah oha-miR-18b-5p mature miRNA
• Sequence: 11 - UAAGGUGCAUCUAGUGCAGUUAG - 33
• Evidence: not_experimental

Mature oha-miR-18b-3p

• Accession: MIMAT0036771
• Description: Ophiophagus hannah oha-miR-18b-3p mature miRNA
• Sequence: 52 - ACUGCCCUGAGUGCUCCUUCUG - 73
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656