Stem-loop oha-mir-16b

Accession

MI0031369

Description

Ophiophagus hannah oha-mir-16b precursor miRNA

Sequence

acuuguuccgcugUAGCAGCACGUAAAUAUUGGUGuaguaaagauaacgCCAAUAUUAUUGUGCUGCUUaagugugacaggga
.((((((.((((..(((((((((..(((((((((((.((....)).)))))))))))..)))))))))..)))).))))))..

Structure

-a      c    gU         UA           a  a 
  cuuguu cgcu  AGCAGCACG  AAUAUUGGUGu gu a
  |||||| ||||  |||||||||  ||||||||||| ||  
  ggacag guga  UCGUCGUGU  UUAUAACCgca ua a
ag      u    aU         UA           a  g 

Annotation confidence Not enough data

Genome context

AZIM01000178.1: 249110-249192 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-16b

Mature oha-miR-16b-5p

• Accession: MIMAT0036746
• Description: Ophiophagus hannah oha-miR-16b-5p mature miRNA
• Sequence: 14 - UAGCAGCACGUAAAUAUUGGUG - 35
• Evidence: not_experimental

Mature oha-miR-16b-3p

• Accession: MIMAT0036747
• Description: Ophiophagus hannah oha-miR-16b-3p mature miRNA
• Sequence: 50 - CCAAUAUUAUUGUGCUGCUU - 69
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656